CDS

Accession Number TCMCG066C09423
gbkey CDS
Protein Id XP_034581483.1
Location join(47192560..47192577,47192714..47192826,47193384..47193459,47193568..47193710,47194419..47194505,47194756..47194839,47195303..47195510,47195874..47195959,47196461..47196692,47196793..47196913,47197124..47197260,47197592..47197700,47198628..47198670,47198810..47198984,47199092..47199162,47199242..47199335,47199490..47199729,47199811..47200017,47200191..47200508,47200610..47200735)
Gene LOC117844804
GeneID 117844804
Organism Setaria viridis

Protein

Length 895aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034725592.1
Definition probable ATP-dependent DNA helicase RecQ [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category L
Description Belongs to the helicase family. RecQ subfamily
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03654        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000018        [VIEW IN EMBL-EBI]
GO:0000217        [VIEW IN EMBL-EBI]
GO:0000287        [VIEW IN EMBL-EBI]
GO:0000400        [VIEW IN EMBL-EBI]
GO:0000403        [VIEW IN EMBL-EBI]
GO:0000405        [VIEW IN EMBL-EBI]
GO:0000723        [VIEW IN EMBL-EBI]
GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0000731        [VIEW IN EMBL-EBI]
GO:0000781        [VIEW IN EMBL-EBI]
GO:0001302        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003684        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004527        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005657        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005813        [VIEW IN EMBL-EBI]
GO:0005815        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006284        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007568        [VIEW IN EMBL-EBI]
GO:0007569        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008408        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009267        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009378        [VIEW IN EMBL-EBI]
GO:0009411        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010212        [VIEW IN EMBL-EBI]
GO:0010225        [VIEW IN EMBL-EBI]
GO:0010259        [VIEW IN EMBL-EBI]
GO:0010332        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030145        [VIEW IN EMBL-EBI]
GO:0031297        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0031669        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032200        [VIEW IN EMBL-EBI]
GO:0032356        [VIEW IN EMBL-EBI]
GO:0032357        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0040009        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0042995        [VIEW IN EMBL-EBI]
GO:0043005        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043138        [VIEW IN EMBL-EBI]
GO:0043140        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044806        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045005        [VIEW IN EMBL-EBI]
GO:0045911        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051054        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051345        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051880        [VIEW IN EMBL-EBI]
GO:0060249        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060542        [VIEW IN EMBL-EBI]
GO:0061749        [VIEW IN EMBL-EBI]
GO:0061820        [VIEW IN EMBL-EBI]
GO:0061821        [VIEW IN EMBL-EBI]
GO:0062037        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070336        [VIEW IN EMBL-EBI]
GO:0070337        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071479        [VIEW IN EMBL-EBI]
GO:0071480        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071897        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090657        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097458        [VIEW IN EMBL-EBI]
GO:0098530        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0120025        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902570        [VIEW IN EMBL-EBI]
GO:1905773        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGGCGGCGCTGAAGGGCTATTTCGGCTACTCGTCGTTCCGACCGTACCAGAGGGAGATCATACAGAAGGTCTTGGATGGGCGGGATTGCCTCGTCGTCATGGCCACCGGCAGCGGCAAGTCCATCTGCTATCAAATACCCCCACTGGTTACAAAGAGGACAGCTGTTGTTGTAAGCCCTCTTCTGTCCCTGATGCAAGACCAGGTTATGAGTTTAAAACAAAAAGGTGTGAAATCTGAGTACCTGGGCAGCACCCAAACAAATAGCTCAGCCAGCAGTGATGCTGAAAAAGGCATATTTGATGTACTATACATGACACCAGAGAAAGCCATTTCACTTCCTTCAAGGTTTTGGAATAACTTGCAGGCTGCCGGAATATGCTTGCTGGCCATTGATGAAGCACATTGCATATCAGAATGGGGACATGATTTCAGGGTGGAGTACAAGCAGTTGCATTTATTGCGCGACCTTCTTGTGGGTGTTCCCTTTGTTGCTTTAACTGCCACAGCCACTGAAAGGGTACGCAAAGATATTTCTACTTCCTTGGTTCTGCGCAATCCTCATGTTGTTGTTGGATCGTTTGATCGTCACAACCTTTTCTATGGTGTGAAGTCATGCAACCGATCTATATCCTTTATCAGTGAACTTGTGAAAGATGTTTCAAAGAGGAGTGCTGTGGGTGAGTCAACAATAATATATTGTACTACCATCCGGGAGACAGAACAGGTTCATGAGGCATTGGTTACTGCTGGAATCAAGTCTGGAATTTACCATGGTCAAATGGGCAGCCGAGCTAGAGAGGAATCCCATAGATCCTTCATTAGGGATGAAGTTCTTGTGATGGTGGCAACTATAGCTTTTGGAATGGGTATTGATAAACCTGATGTTAGATGTGTAATACACTATGGATGTCCAAAGAGCCTGGAGTCCTACTACCAGGAAAGTGGGCGTTGTGGAAGGGATGGTCTGTCTTCAGTCTGCTGGCTATATTACCAAAGAAGTGATTTTACGAAAGCTGACTTTTATTGTGCCGAGGCAAAAAATGGAACCCAGAGGAAAGCAATCATGGATTCCTTCATGGCAGCACAAAAATATTGCCTCCTTGCTACATGCCGCAGAAGGTTCTTATTGCAGTATTTTGGCGAAGAGCTCAACTCCGACTGTGGTAACTGTGATAACTGCACAGCAGTGAAAAATGTTAGAGATTTGTCAAAAGAAACTTTTTTGTTGCTGTCGTGCATCAAATCTTGTGGAGGACGCTGGGGCCTTAATTTACCTATTGATGTTCTCCGTGGATCACGAGCGAAGAAAATTGTTGACAACAATTATGATAAACTACAAATGCATGGACGAGGTAAAGACTACTCACCAAACTGGTGGAAAGCACTTGGTGGCCTCCTTATAGCACATGATTACTTGAAGGAGACTGTCCGTGATACATTTAGATTTGTCAGCGTCAGTCCAAAAGGGGTCAAGTTTCTCTCTACTGCTGATAAAATGGATGGAACACCACTGGTTTTACAGCTGACTGCAGAGATGATTGATCTAGAGGAACATGGTAGTTCACAGCACAAAGAAGGTGGTGGTTTAAATCTTGTGCCCACATTAGAGTCTGAAAAATTTTCTGAGGATGAATCAAAACTCTATCAAATGCTCCTCAATGTCAGGATGAAGCTTGCTCAAGATATTGGGACCGCTCCATATGCTATATGTGGTGATCAGACAATAAGAAACTTTGCAAAGATGAGGCCTTCAACTGGAGCTAGACTTGCTAATATCGATGGTGTCAACCAGCATTTTATCTCGCGTTTCAGTGGCATTTTCATCCAAAATATCACACAATTGTCGAAGGAGTTAAACCTTCCATTGGATAATTCACCATTACCACCACCACCACCAACAAATCCAGCTGTGGAAAATATAGCTGGTTTACCGAAGCCTGTACAAAACAATCTTCCAGGTATCTTGGGTGATGCAAAGTTGACTGCATGGGAATTGTGGCAGAAGCAGGAGTTTTCATTCCTGAAAATCGCATATTTTCGCAGAGCCGTGCCAATAAAAGAGCAAACAGTTATTGCCTACATACTTGATGCTGCTCGAGAAGGATGTGAGGTGGATTGGAGTAGGTTTTGCAGGGAGGTAGGGCTGACACCTGAGATAGCCTCAGGGATCCAACTTGCAATTGCAAAGGCTGGATCACGTGACAAGTTGAAGCCAATCAAAGAGGAGCTCCCAGAGAATGTAACTTACGACATGATCAAGACATTCCTGACGATTGAGGGGCGTGGATTGTCAGAGCAAGTTTTCGGTAGTGCACCTGCTTCCTCCCATGCAACCGAAGCCGGCGGAGATGATAATCCGGGAGATGGTGTCCTAACGGCTGATACTCTTGATGCAAACCCTTCAGCAAAGAGAGGCTGCCAAACCGACGGCATGATTGGTTCTGCTGATCAGCCAGCAATGAAACAGCAAAAGATAGAAGAGCATGGAGTTGAATCTTCTGGCACAACTGTCGCCACTGAAGAATCTGTGCTAGAGCTTGTCGCCAGCCGCGATGGGGTGTTATTAGACGAAGTTGTCAAGCACTTCAATGGATCCAAGAGAGAATCAGTTGTTGAGATATTGGACAGCCTCGAATCCGAATTCGAAATTTACAAGAAAAATGGGAAATACAAGATCATGTAA
Protein:  
MEAALKGYFGYSSFRPYQREIIQKVLDGRDCLVVMATGSGKSICYQIPPLVTKRTAVVVSPLLSLMQDQVMSLKQKGVKSEYLGSTQTNSSASSDAEKGIFDVLYMTPEKAISLPSRFWNNLQAAGICLLAIDEAHCISEWGHDFRVEYKQLHLLRDLLVGVPFVALTATATERVRKDISTSLVLRNPHVVVGSFDRHNLFYGVKSCNRSISFISELVKDVSKRSAVGESTIIYCTTIRETEQVHEALVTAGIKSGIYHGQMGSRAREESHRSFIRDEVLVMVATIAFGMGIDKPDVRCVIHYGCPKSLESYYQESGRCGRDGLSSVCWLYYQRSDFTKADFYCAEAKNGTQRKAIMDSFMAAQKYCLLATCRRRFLLQYFGEELNSDCGNCDNCTAVKNVRDLSKETFLLLSCIKSCGGRWGLNLPIDVLRGSRAKKIVDNNYDKLQMHGRGKDYSPNWWKALGGLLIAHDYLKETVRDTFRFVSVSPKGVKFLSTADKMDGTPLVLQLTAEMIDLEEHGSSQHKEGGGLNLVPTLESEKFSEDESKLYQMLLNVRMKLAQDIGTAPYAICGDQTIRNFAKMRPSTGARLANIDGVNQHFISRFSGIFIQNITQLSKELNLPLDNSPLPPPPPTNPAVENIAGLPKPVQNNLPGILGDAKLTAWELWQKQEFSFLKIAYFRRAVPIKEQTVIAYILDAAREGCEVDWSRFCREVGLTPEIASGIQLAIAKAGSRDKLKPIKEELPENVTYDMIKTFLTIEGRGLSEQVFGSAPASSHATEAGGDDNPGDGVLTADTLDANPSAKRGCQTDGMIGSADQPAMKQQKIEEHGVESSGTTVATEESVLELVASRDGVLLDEVVKHFNGSKRESVVEILDSLESEFEIYKKNGKYKIM